From a6776b061b9f8764d6b64ce25290418a15845610 Mon Sep 17 00:00:00 2001 From: leelieber2025 <230850688+leelieber2025@users.noreply.github.com> Date: Tue, 14 Jul 2026 21:03:35 -0400 Subject: [PATCH 1/2] Create meta.yaml --- packages/scATrans/meta.yaml | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) create mode 100644 packages/scATrans/meta.yaml diff --git a/packages/scATrans/meta.yaml b/packages/scATrans/meta.yaml new file mode 100644 index 0000000..424f50e --- /dev/null +++ b/packages/scATrans/meta.yaml @@ -0,0 +1,26 @@ +name: scATrans +description: | + scATrans is a Python toolkit for single-cell differential analysis that computes a + composite "active transcription" score from AnnData objects carrying spliced/unspliced + (mature/nascent) RNA layers. It also provides conventional DE, pseudobulk, gene-set + enrichment, and visualization workflows through scanpy-compatible APIs. +project_home: https://github.com/leelieber2025/scATrans +documentation_home: https://scatrans.readthedocs.io/ +tutorials_home: https://scatrans.readthedocs.io/en/latest/tutorials/index.html +install: + pypi: scatrans + conda: bioconda::scatrans +tags: + - single-cell + - differential expression + - rna velocity + - unspliced rna + - gene set enrichment + - active transcription +license: Apache-2.0 +version: 0.10.3 +contact: + - leelieber2025 +test_command: | + pip install ".[dev]" && pytest -m "not plot and not slow" +category: ecosystem From d132d6fb3802a75ee0bb5760f78373fc471e1bc3 Mon Sep 17 00:00:00 2001 From: leelieber2025 <230850688+leelieber2025@users.noreply.github.com> Date: Tue, 14 Jul 2026 21:19:14 -0400 Subject: [PATCH 2/2] Update meta.yaml --- packages/scATrans/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/packages/scATrans/meta.yaml b/packages/scATrans/meta.yaml index 424f50e..590b674 100644 --- a/packages/scATrans/meta.yaml +++ b/packages/scATrans/meta.yaml @@ -6,7 +6,7 @@ description: | enrichment, and visualization workflows through scanpy-compatible APIs. project_home: https://github.com/leelieber2025/scATrans documentation_home: https://scatrans.readthedocs.io/ -tutorials_home: https://scatrans.readthedocs.io/en/latest/tutorials/index.html +tutorials_home: https://scatrans.readthedocs.io/page/tutorials/index.html install: pypi: scatrans conda: bioconda::scatrans