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update cache related tested #62

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Merged
jkanche merged 6 commits into from
Aug 22, 2025
Merged

update cache related tested #62

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fea55aa
update cache related tested
jkanche Aug 22, 2025
4ef8774
update again
jkanche Aug 22, 2025
52a32dd
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Aug 22, 2025
bd143d2
lets do both ways
jkanche Aug 22, 2025
ff6dd42
Merge branch 'update_tests' of https://github.com/biocpy/iranges into…
jkanche Aug 22, 2025
d79678d
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Aug 22, 2025
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12 changes: 11 additions & 1 deletion tests/test_IRanges.py
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Original file line number Diff line number Diff line change
Expand Up @@ -224,5 +224,15 @@ def test_index():

i2.set_start(i2.start + 90, in_place=True)
mod = i1.intersect_ncls(i2, delete_index=False)

assert len(orig) != len(mod)

i2 = IRanges(start=np.array([105, 205, 305], dtype=np.int32), width=np.array([20, 20, 20], dtype=np.int32))
i2.intersect_ncls(i1, delete_index=False) # perform some operation to check if the index is cached
i1.intersect_ncls(i2, delete_index=False)

i3 = i2.set_start(i2.start + 90)
mod2 = i1.intersect_ncls(i3)
assert len(orig) != len(mod2)
assert len(mod) == len(mod2)
assert np.allclose(mod.get_start(), mod2.get_start())
assert np.allclose(mod.get_end(), mod2.get_end())