Issues

• Regression feature selection (alpha=30) over-regularizes to zero features on real data — blocks NB & Cox endpoints

  bug
  CTN-0094/Pipeline#22 · Filter by author GaneshJainarain opened on Jul 17, 2026
  

• Add Integer (Negative Binomial) and Survival (Cox) outcome columns to dataset

  enhancement
  CTN-0094/Pipeline#21 · Filter by author GaneshJainarain opened on Jul 10, 2026

• Upgrade to Python 3.12

  CTN-0094/Pipeline#18 · Filter by author GaneshJainarain opened on Dec 5, 2024

• Fix the outcome argument to 1) map integers, and 2) allow for character string. Output:

  CTN-0094/Pipeline#15 · Filter by author GaneshJainarain opened on Dec 4, 2024
  

• issue

  CTN-0094/Pipeline#14 · Filter by author GaneshJainarain opened on Dec 4, 2024
  1

  

• Add validation split to each data "universe"

  CTN-0094/Pipeline#13 · Filter by author gabrielodom opened on Nov 19, 2024
  8

  

• Going Forward: Transition to a Generalized Pipeline (Next Version)

  bugdocumentationenhancement
  CTN-0094/Pipeline#12 · Filter by author GaneshJainarain opened on Nov 4, 2024
  1

  

• Data Cleaning

  enhancement
  CTN-0094/Pipeline#11 · Filter by author GaneshJainarain opened on Nov 4, 2024
  2

  

• Feature Selection and Model Fitting (train_model.py)

  bugenhancement
  CTN-0094/Pipeline#10 · Filter by author GaneshJainarain opened on Nov 4, 2024
  1

  

• Demographic Processing

  enhancement
  CTN-0094/Pipeline#9 · Filter by author GaneshJainarain opened on Nov 4, 2024
  

• Data Loading

  enhancement
  CTN-0094/Pipeline#8 · Filter by author GaneshJainarain opened on Nov 4, 2024
  

• Data Handling

  enhancement
  CTN-0094/Pipeline#7 · Filter by author GaneshJainarain opened on Nov 4, 2024
  

• Outcomes

  enhancement
  CTN-0094/Pipeline#6 · Filter by author GaneshJainarain opened on Nov 4, 2024
  

• Profile Flag

  documentation
  CTN-0094/Pipeline#5 · Filter by author GaneshJainarain opened on Nov 4, 2024
  2

  

• Confirm that the pipeline can "take in" a realised (trained) model in a python script

  enhancement
  CTN-0094/Pipeline#3 · Filter by author gabrielodom opened on Sep 13, 2024
  1

• Predictions with LASSO use different method than in JAMA paper

  bug
  CTN-0094/Pipeline#2 · Filter by author gabrielodom opened on Sep 6, 2024
  4

  

• Write gentle guide for installing python for new analysts

  enhancement
  CTN-0094/Pipeline#1 · Filter by author gabrielodom opened on Sep 5, 2024
  6