All pull requests

Pull requests

• Datashader Heatmap Mode for visualize_2D_scatter #432

  #432·Jerrymiah12 opened May 5, 2026·

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• Leiden Clustering Module for SPAC

  #431·ramyap06 opened Apr 30, 2026·

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• Add PhenoGraph GPU refactor: new transform module, CPU/GPU templates,…

  #429·fangliu117 opened Apr 21, 2026Collaborator·

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• refactor(templates): use pio.to_image() for relational heatmap PNG ex…

  #413·georgezakinih opened Nov 26, 2025Contributor·

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• feat: refactor structure of galaxy_tool

  #404·fangliu117 opened Oct 3, 2025Collaborator·

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• feat(ripley_template): Add Ripley‑L template, helpers, fixtures and t…

  #355·fangliu117 opened Jul 16, 2025Collaborator·

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• feat(plot_qc_metrics): plot single cell quality control metrics

  #354·abombin opened Jul 15, 2025Contributor·

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• Merged dim spatial

  #350·ying39purdue opened Jun 4, 2025Contributor·

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• feat(downsample):AnnData input and output for downsample_cells

  #349·Chloe-Thangavelu opened May 29, 2025Contributor·

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• Heatmap to show cell counts

  #344·georgezakinih opened May 23, 2025Contributor·

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• feat(core): added compare_annotations function and unit tests

  #336·arshnrr opened May 1, 2025Contributor·

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• Adding Pin Colors to Dimensionality Reduction Plot

  #334·LizaShch opened Apr 28, 2025·

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• Adding Pin Colors to Scatterplot

  #333·LizaShch opened Apr 28, 2025·

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• Datashader Heatmap Visualization Function

  #330·LizaShch opened Apr 17, 2025·

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• Adding Pin_Colors to Histogram

  #329·LizaShch opened Apr 17, 2025·

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• Histogram facet plot

  #328·ying39purdue opened Apr 15, 2025Contributor·

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• Add example usage lymph node data and notebooks

  #326·fangliu117 opened Apr 14, 2025Collaborator·

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