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Fix wrong output filename in pctpairprotons #98

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Fix wrong output filename in pctpairprotons #98

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3 changes: 2 additions & 1 deletion applications/pctpairprotons/pctpairprotons.py
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Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
#!/usr/bin/env python
import argparse
import json
import re
import itk
from itk import PCT as pct
import numpy as np
Expand Down Expand Up @@ -242,7 +243,7 @@ def load_tree_as_df(root_file, tree_name):

df_itk = itk.GetImageFromArray(ps_np, ttype=ImageType)

output_file = args_info.output.replace(".", f"{r:04d}.")
output_file = re.sub("\\.mhd$", f"{r:04d}.mhd", args_info.output)
itk.imwrite(df_itk, output_file)
verbose(f"Wrote file {output_file}.")

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