Issues

• colouring two compare matrices in different colours

  akdemirlab/HiCPlotter#60 · Filter by author ChaitaliChakraborty opened on Sep 23, 2024

• Whole genome can be plotted only as matrix

  akdemirlab/HiCPlotter#59 · Filter by author yeeus opened on Sep 10, 2023

• no error report but hic maps of some chromosomes are empty

  akdemirlab/HiCPlotter#58 · Filter by author jimie0311 opened on Jun 20, 2023

• unbalanced matrix(hap2-hicpro/hic_results/matrix/sample1/iced/150000/sample1_150000_iced.matrix)! input should be a square matrix

  akdemirlab/HiCPlotter#57 · Filter by author Jiangjiangzhang6 opened on Jun 4, 2023
  3

• Arcs for inter-chromosomal interacations

  akdemirlab/HiCPlotter#56 · Filter by author jeff-godwin opened on May 30, 2023

• Version

  akdemirlab/HiCPlotter#55 · Filter by author jowodo opened on Mar 2, 2023

• insulation score

  akdemirlab/HiCPlotter#54 · Filter by author jdmontenegro opened on Oct 13, 2022

• HiCPlotter.py

  akdemirlab/HiCPlotter#53 · Filter by author tamerbio opened on Sep 19, 2022

• error with HI-C pro. invalid literal for int() with base 10

  akdemirlab/HiCPlotter#51 · Filter by author canfeng-HUA opened on Apr 26, 2021
  2

• Missing module

  akdemirlab/HiCPlotter#50 · Filter by author xiaoyonf opened on Dec 18, 2020

• Can not plot exon ？

  akdemirlab/HiCPlotter#49 · Filter by author wzhjlau2009 opened on Mar 13, 2020

• Put together multiple triangular heatmaps vertically?

  akdemirlab/HiCPlotter#47 · Filter by author zhang-jiankun opened on Dec 11, 2019

• line 57, SyntaxError emerged while doing the testRun.

  akdemirlab/HiCPlotter#46 · Filter by author boya888 opened on Aug 17, 2019
  1

• chromosome pair HiC

  akdemirlab/HiCPlotter#45 · Filter by author yangxiaofeill opened on Jul 17, 2019

• add grib line between each two chromosome

  akdemirlab/HiCPlotter#44 · Filter by author xinwang-bio opened on Jul 10, 2019

• rao et al 2014 reproducing results

  akdemirlab/HiCPlotter#43 · Filter by author Nohaosma opened on Jul 9, 2019
  2

• Setting a color range for the heatmap plot

  akdemirlab/HiCPlotter#42 · Filter by author rikrdo89 opened on Jul 2, 2019
  1

• Limitations with triple sparse format?

  akdemirlab/HiCPlotter#40 · Filter by author Dibabbudia opened on Mar 12, 2019
  2

• How to place a circle(used for labeling the peak ) encircle the pixel in Hi-C heatmap instead of between two pixels

  akdemirlab/HiCPlotter#38 · Filter by author liufuyan2016 opened on Feb 25, 2019
  1

• plot multiple bed files as bar plots below the matrix

  akdemirlab/HiCPlotter#36 · Filter by author girdhar3 opened on Feb 11, 2019
  2

• some question when comparing two matrix

  akdemirlab/HiCPlotter#34 · Filter by author mickish6002 opened on Jan 16, 2019
  1

• some error when Plot the genome-wide map at 40000kb resolution

  akdemirlab/HiCPlotter#33 · Filter by author xiaorenwu1111 opened on Nov 15, 2018
  1

• Adding gene file to HiCPlotter "missing values" issue

  akdemirlab/HiCPlotter#32 · Filter by author awezmm opened on Oct 24, 2018
  5

• HiCPlotter 0.8.1 cuts "chr" from sequence titles

  akdemirlab/HiCPlotter#22 · Filter by author shelkmike opened on Oct 26, 2017
  1