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dcterms:isPartOf vocabulary links + mint-publish tag parity (v0.2.1) - #5
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Add a `part_of` option that links each term to a vocabulary URI via dcterms:isPartOf in its assertion. Threaded through the shared chokepoints so it covers both flows: term_input_from_assertion (defining, used by migrate and mint-publish) and _resolve_all (superseding). Exposed as --part-of on pubmate-migrate and pubmate-mint-publish. Also give pubmate-mint-publish the --nanopub-type/--template pubinfo tags it was missing, so incrementally-published terms match migrated ones. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
GertjanBisschop
approved these changes
Jun 26, 2026
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Summary
Adds a
part_ofoption that emits adcterms:isPartOflink from each term to a vocabulary URI in the assertion graph, and closes a tagging parity gap inpubmate-mint-publish.dcterms:isPartOf(assertion-graph vocabulary membership)Threaded through the two shared chokepoints so it covers migration and incremental publishing:
minting.term_input_from_assertion— defining nanopubs (used by bothmigrateandmint-publish)migrate._resolve_all— superseding nanopubsExposed as
--part-ofon bothpubmate-migrateandpubmate-mint-publish.mint-publish tag parity
pubmate-mint-publishpreviously lacked--nanopub-type/--template, so incrementally published terms would be inconsistent with migrated ones. Added both options (same pubinfo tags as the migration path).Testing
Full suite: 99 passed. New tests:
test_minting.py::test_term_input_adds_part_of_linktest_migrate.py::test_part_of_link_on_defining_and_supersedingtest_cli_mint_publish.py::test_mint_publish_adds_part_of_type_and_templateNotes
Based on eu-parc/main (v0.2.0, #4); this PR is the single follow-up commit. Tag
v0.2.1after merge.🤖 Generated with Claude Code