Gymrek Lab at UC San Diego

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1. TRTools TRTools Public

   Toolkit for genome-wide analysis of tandem repeats

   Python 64 24

2. EnsembleTR EnsembleTR Public

   Tools for merging Tandem Repeat VCF files

   Python 39 6

3. LongTR LongTR Public

   Tandem repeat genotyping with long reads

   C++ 39 7

4. webstr webstr Public

   WebSTR database and web application code

   JavaScript 8 4

5. CAHMML CAHMML Public

   Custom Lambda HMM Library

   Python 5

6. happler happler Public

   A haplotype-based fine-mapping method

   Python 3