Add automated detection of CG base-pairs to dna-restraints.cns

[amjjbonvin]

Desired feature/enhancement

Currently the dna-restraints.cns script (present in flexref emref mdref cgtoaa mdscoring) is only detecting base pairs and defining restraints for all atoms models. This should also be done for coarse-grained models.

Motivation

Ensure base pairing in CG mode

Description

Adapt the CNS script to automatically detect base pairs and define distance restraints.

[github-actions]

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