Caching stage3 - #1688

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sjdv1982 wants to merge 21 commits into

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Commits on Sep 2, 2026

Record how the CNS caching work is staged and reviewed

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ce842d7
Return parallel scheduler results in submission order

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1a5866a
Honour the clamped sampling_factor in emref and mdref

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adc0915
Keep coarse-grain back-mapping inputs aligned with their molecules

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e0db6a8
Seed coarse-grained topology generation from iniseed

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4b066c8
Derive every CNS seed from the job it belongs to

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b403487
Schedule rigid-body sampling prefix-stably

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df00483
Emit refinement replicas in rounds in flexref, emref and mdref

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3da28d1

Commits on Sep 3, 2026

Restrict generated CNS input to parameters the recipes can read

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187ff63
Normalize CNS output artifacts to remove run-volatile provenance

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9b91995
Publish complete CNS output sets atomically

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a4ede84
Publish batch and grid CNS outputs per task, without overriding tolerance

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31ea868
Add the virtual canonical CNS representation

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87ffb31
Pin canonical forms for every generated CNS job shape

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d61ef44
Add the CNS caching contract suite

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8d67e96
Let the caching suite stand on its own

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6a0716d
Judge a source artifact by whether it was published, not by its length

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9791f56
Do not assert a verdict the oracle cannot derive

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c09ae5a
Turn the canonical CNS representation into a cache key

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bd136d3
Serve CNS jobs from a content-addressed cache

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26c9271
install caching-stage4 Seamless deps (pending clean stage3/stage4 separation)
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9b00ab0