Issues

• multiple run request processes are running - check if this is a bug

  markziemann/dee2#132 · Filter by author markziemann opened on Oct 2, 2026

• On-demand backlog

  markziemann/dee2#131 · Filter by author markziemann opened on Oct 2, 2026

• FASTQC causes a problem - can we fix?

  markziemann/dee2#115 · Filter by author markziemann opened on Sep 11, 2025

• Problem with single end fastq files

  markziemann/dee2#110 · Filter by author markziemann opened on Jun 13, 2025

• DEE2 Docker container fails with count file mismatch error

  markziemann/dee2#107 · Filter by author fejung opened on May 24, 2025
  2

• Correct representation of ncRNA in kallisto ressults

  markziemann/dee2#104 · Filter by author markziemann opened on Nov 13, 2024

• Number of mouse transcripts in annotation

  pipelinewontfix
  markziemann/dee2#49 · Filter by author apredeus opened on May 17, 2019
  4