Issues

• Segmentation fault due to unchecked empty vector in haplotype_set::allocatePBWT()

  odelaneau/GLIMPSE#304 · Filter by author mattcloward opened on Jul 30, 2026
  3

• Glimpse2 issue (Phase and Impute)

  odelaneau/GLIMPSE#293 · Filter by author gunmeet13 opened on May 7, 2026
  3

• ARM64 support

  odelaneau/GLIMPSE#284 · Filter by author LouisLeNezet opened on Mar 30, 2026
  6

• Imputate chrX and chrY using GLIMPSE2

  odelaneau/GLIMPSE#265 · Filter by author AHassouneh opened on Jun 13, 2025

• GLIMPSE2_concordance: Some question about concordance

  odelaneau/GLIMPSE#251 · Filter by author Truongphikt opened on Jan 19, 2025
  1

• Checking "burn-in" vs "burn" vs "burnin" arguments - consistent references?

  odelaneau/GLIMPSE#246 · Filter by author bgulko opened on Dec 10, 2024

• GLIMPSE2_phase using more CPU than expected

  odelaneau/GLIMPSE#245 · Filter by author alshai opened on Nov 25, 2024

• boost incompatibility with v2.0.1

  odelaneau/GLIMPSE#244 · Filter by author baihesun opened on Nov 18, 2024
  2

• Ask about header of *rsquare.grp.txt.gz, output of GLIMPSE2 concordance

  odelaneau/GLIMPSE#235 · Filter by author Truongphikt opened on Oct 30, 2024
  1

• --max-depth request

  odelaneau/GLIMPSE#232 · Filter by author Ahhgust opened on Oct 3, 2024

• Glimpse2_phase (2.0.0) segfault - but only with large number of variants in reference panel.

  odelaneau/GLIMPSE#227 · Filter by author bgulko opened on Aug 12, 2024

• accuracy of imputed genotypes

  odelaneau/GLIMPSE#226 · Filter by author felassadi opened on Aug 9, 2024

• GLIMPSE_phase (v1.1.1) segfault during finalization

  odelaneau/GLIMPSE#225 · Filter by author TedBrookings opened on Aug 5, 2024
  1

• Floating point exception (core dumped) when run GLIMPSE2_phase

  odelaneau/GLIMPSE#220 · Filter by author dangcaptkd2 opened on Jul 16, 2024
  2

• How to imputate chrX using GLIMPSE2

  odelaneau/GLIMPSE#218 · Filter by author raksasa opened on Jul 10, 2024
  1

• ESC[31mERROR: ESC[0mStates for individual 0 are zero. Error during selection.

  odelaneau/GLIMPSE#217 · Filter by author NahlaHu opened on Jun 30, 2024

• ERROR: Overlap between buffer-specific variants

  odelaneau/GLIMPSE#211 · Filter by author drneavin opened on May 14, 2024
  2

• "High Proportion of SNPs with MAF of 0 in Imputed Low-Coverage Samples: Normal or Indicative of Issues?"

  odelaneau/GLIMPSE#209 · Filter by author waitingwaitinghu opened on Apr 16, 2024
  1

• Information regarding GLIMPSE2_split_reference

  odelaneau/GLIMPSE#207 · Filter by author dev3105 opened on Apr 4, 2024

• Buffer bug???

  odelaneau/GLIMPSE#206 · Filter by author leedchou opened on Mar 29, 2024
  3

• Question Regarding the Use of GLIMPSE2 for Imputation

  odelaneau/GLIMPSE#205 · Filter by author Taewoong-Ha opened on Mar 21, 2024

• Issue in compiling GLIMPSE2

  odelaneau/GLIMPSE#203 · Filter by author dev3105 opened on Mar 15, 2024
  1

• Imputing Indels in low coverage WGS

  odelaneau/GLIMPSE#201 · Filter by author sumudu-rangika opened on Mar 11, 2024

• GLIMPSE2_ligate: Three files overlapping at position

  odelaneau/GLIMPSE#196 · Filter by author Truongphikt opened on Jan 17, 2024
  10

• GLIMPSE2_split_reference ERROR: AC/AN INFO fields in VCF are inconsistent with GT field, update the values in the VCF

  odelaneau/GLIMPSE#189 · Filter by author jpcartailler opened on Nov 3, 2023
  7