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26 changes: 26 additions & 0 deletions packages/scATrans/meta.yaml
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name: scATrans
description: |
scATrans is a Python toolkit for single-cell differential analysis that computes a
composite "active transcription" score from AnnData objects carrying spliced/unspliced
(mature/nascent) RNA layers. It also provides conventional DE, pseudobulk, gene-set
enrichment, and visualization workflows through scanpy-compatible APIs.
project_home: https://github.com/leelieber2025/scATrans
documentation_home: https://scatrans.readthedocs.io/
tutorials_home: https://scatrans.readthedocs.io/page/tutorials/index.html
install:
pypi: scatrans
conda: bioconda::scatrans
tags:
- single-cell
- differential expression
- rna velocity
- unspliced rna
- gene set enrichment
- active transcription
license: Apache-2.0
version: 0.10.3
contact:
- leelieber2025
test_command: |
pip install ".[dev]" && pytest -m "not plot and not slow"
category: ecosystem
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