perf: numba based aggregations for sparse data#4062
Merged
Codecov / codecov/project
succeeded
Apr 16, 2026 in 1s
78.63% (target 75.00%)
View this Pull Request on Codecov
78.63% (target 75.00%)
Details
Codecov Report
❌ Patch coverage is 97.22222% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 78.63%. Comparing base (87dc1ec) to head (83c0668).
✅ All tests successful. No failed tests found.
| Files with missing lines | Patch % | Lines |
|---|---|---|
| src/scanpy/get/_aggregated.py | 96.77% | 1 Missing |
Additional details and impacted files
@@ Coverage Diff @@
## main #4062 +/- ##
==========================================
+ Coverage 78.61% 78.63% +0.02%
==========================================
Files 117 118 +1
Lines 12713 12729 +16
==========================================
+ Hits 9994 10010 +16
Misses 2719 2719 | Files with missing lines | Coverage Δ | |
|---|---|---|
| src/scanpy/get/_kernels.py | 100.00% <100.00%> (ø) |
|
| src/scanpy/get/_aggregated.py | 93.30% <96.77%> (+0.34%) |
⬆️ |
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