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mmseqs2: add missing include when +cuda #2752

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mmseqs2: add missing include when +cuda #2752

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6 changes: 6 additions & 0 deletions repos/spack_repo/builtin/packages/mmseqs2/package.py
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Original file line number Diff line number Diff line change
Expand Up @@ -49,6 +49,12 @@ class Mmseqs2(CMakePackage, CudaPackage):
level=1,
)

@when("@18-8cc5c+cuda")
def patch(self):
filter_file(
r'^(#include "GpuUtil.h")', "\\1\n#include <thread>\n", "src/util/gpuserver.cpp"
)

# apple-clang will build with +openmp with llvm-openmp as a dependency
# however when running with real data, it threw segmentation faults
conflicts("%apple-clang", when="+openmp")
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