GRAph-based Finding of Individual Motif Occurrences
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Updated
Aug 29, 2024 - Python
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motif-scanning
Here are 5 public repositories matching this topic...
Pipeline: Identification of cis-regulatory elements by matrix scoring and analysis of supporting empirical biological data.
python bioinformatics pipeline genomics gene-regulation gtex chip-seq jaspar transcription-factor tfbs regulatory-genomics cis-regulatory-elements motif-scanning evolutionary-conservation
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Sep 6, 2026 - Python
Pipeline: Identification of cis-regulatory elements by matrix scoring and conservation.
python bioinformatics pipeline genomics gene-regulation jaspar transcription-factor tfbs regulatory-genomics cis-regulatory-elements motif-scanning evolutionary-conservation
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Jul 22, 2026 - Python
Computational biology toolkit and agent skill for JASPAR transcription factor binding profile visualization, sequence logo rendering, PFM/PPM/PWM matrix analysis, dual-strand DNA sequence scanning, and interactive HTML5 dashboards.
python svg bioinformatics transcription-factors genomics computational-biology data-visualization gene-regulation fasta dna-motif motif-discovery jaspar sequence-logo shannon-entropy position-weight-matrix regulatory-genomics motif-scanning interactive-dashboard agent-skill tfclass
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Sep 25, 2026 - HTML
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