refactor(memory): finish TinyCortex consolidation

.github/workflows/ci-lite.yml

@@ -856,7 +856,7 @@ jobs:
           key: tinycortex
 
       - name: Run TinyCortex engine and Composio sync tests
-        run: bash scripts/ci-cancel-aware.sh cargo test --manifest-path vendor/tinycortex/Cargo.toml --features git-diff,sync
+        run: bash scripts/ci-cancel-aware.sh cargo test --manifest-path vendor/tinycortex/Cargo.toml --features git-diff,sync,persona
 
   pr-ci-gate:
     name: PR CI Gate

Cargo.toml

@@ -109,10 +109,12 @@ tinyagents = { version = "2.1", features = ["sqlite"] }
 # queue/ingest/score + long tail), vendored as a git submodule and patched
 # below to `vendor/tinycortex`. OpenHuman's memory subsystem migrates onto this
 # crate through the adapter seam in `src/openhuman/tinycortex/` (mirroring the
-# tinyagents seam): engine logic in the crate; RPC, agent tools, live sync,
-# security gating, and the global singleton stay host-side. rusqlite/git2 are
+# tinyagents seam): engine logic (including provider sync pipelines) in the
+# crate; RPC, agent tools, sync scheduling/credentials/events, security gating,
+# and the global singleton stay host-side. rusqlite/git2 are
 # aligned to the host pins (=0.40 / 0.21) so one bundled SQLite + one libgit2
-# link. Keep the version pin in lockstep with the submodule tag.
+# link. The submodule intentionally tracks reviewed upstream main commits;
+# keep this semver requirement compatible with the vendored crate version.
 tinycortex = { version = "0.1", features = ["git-diff", "persona", "sync"] }
 tinychannels = { version = "0.1", features = ["relay-websocket"] }
 serde = { version = "1", features = ["derive"] }
@@ -704,12 +706,6 @@ tinyjuice = { path = "vendor/tinyjuice" }
 tinychannels = { path = "vendor/tinychannels" }
 tinyplace = { path = "vendor/tinyplace/sdk/rust" }
 
-# TinyCortex temporarily pins the embedding API port while tinyagents #58 is
-# pending. Resolve that git source to the same vendored crate so host adapters
-# and TinyCortex share one `EmbeddingModel` trait identity.
-[patch."https://github.com/senamakel/tinyagents"]
-tinyagents = { path = "vendor/tinyagents" }
-
 # Emit just enough DWARF in release builds for Sentry to symbolicate Rust
 # panics + render surrounding source lines. `line-tables-only` keeps the
 # binary small (only file+line tables, no full type info) while still

docs/TEST-COVERAGE-MATRIX.md

@@ -366,10 +366,10 @@ End-to-end coverage of the agent harness via the web-chat RPC surface against an
 | ----- | ------------------------------------------ | ----- | -------------------------------------------------------------------------------------------------------------- | ------ | ----------------------------------------------------------------------- |
 | 8.4.1 | Save Preference (general / situational)    | RU    | `src/openhuman/agent/tools/save_preference_tests.rs`                                                           | ✅     | `save_preference` tool → `user_pref_{general,situational}`, topic-keyed |
 | 8.4.2 | Lane A — Standing Prefs in System Prompt   | RU    | `src/openhuman/learning/prompt_sections.rs`, `src/openhuman/agent/harness/session/turn_tests.rs`               | ✅     | General prefs rendered into the system prompt at thread start           |
-| 8.4.3 | Lane B — Situational Recall (vector-gated) | RU    | `src/openhuman/memory/store/unified/query_tests.rs::recall_relevant_by_vector_gates_on_similarity`             | ✅     | Per-turn; relevant query injects, unrelated suppresses                  |
+| 8.4.3 | Lane B — Situational Recall (vector-gated) | RU    | `src/openhuman/memory_store/namespace_store/query_tests.rs::recall_relevant_by_vector_gates_on_similarity`             | ✅     | Per-turn; relevant query injects, unrelated suppresses                  |
 | 8.4.4 | Same-Topic Contradiction (replace)         | RU    | `src/openhuman/agent/tools/save_preference_tests.rs::recategorising_moves_pref_between_namespaces`             | ✅     | `ON CONFLICT REPLACE`; a topic lives in exactly one scope               |
 | 8.4.5 | Cross-Topic Contradiction Surfacing        | RU    | `src/openhuman/agent/tools/save_preference_tests.rs::save_surfaces_related_preference_for_contradiction_check` | ✅     | Related prefs surfaced in the tool result for the chat agent to resolve |
-| 8.4.6 | vector_chunks Model-Signature Recall Guard | RU    | `src/openhuman/memory/store/unified/query_tests.rs::vector_recall_excludes_other_model_signature`              | ✅     | Excludes cross-model vectors; dim-guards legacy rows                    |
+| 8.4.6 | vector_chunks Model-Signature Recall Guard | RU    | `src/openhuman/memory_store/namespace_store/query_tests.rs::vector_recall_excludes_other_model_signature`              | ✅     | Excludes cross-model vectors; dim-guards legacy rows                    |
 
 ### 8.5 Long-term Goals
 

docs/tinycortex-api-gap-audit.md

@@ -1,5 +1,10 @@
 # TinyCortex API Gap Audit (Phase 0.2)
 
+**Status (2026-07-22):** Historical gap inventory for the completed engine
+cutover. Counts and source anchors below describe the audit base; unresolved
+host consolidation work, including G1 re-homing and sync dedupe, is tracked in
+`tinycortex-migration-plan-2026-07-22.md`.
+
 **Purpose.** Map every host call site into the engine-mapping modules
 (`memory_store`, `memory_tree`, `memory_queue`, and the long tail) onto a TinyCortex
 public API. Where no crate API covers a host need, record a **gap** — each gap becomes a
@@ -48,16 +53,16 @@ The crate exposes every seam the plan expects, plus more. Host implements these:
 | `Summariser` (time-tree, string) | `tree/runtime/engine.rs:29` | **divergent — see G6** |
 | `EntityExtractor` (regex + LLM) | `score/extract/composite.rs:16` | `tinycortex/chat.rs` (LLM variant) |
 | `QueueDelegates` | `queue/handlers.rs:96` | `tinycortex/queue_driver.rs` |
-| `TreeJobSink` | `ingest/types.rs:15` | `tinycortex/sinks.rs` |
-| `TreeLeafSink` | `archivist/sink.rs:44` | `tinycortex/sinks.rs` |
-| `SnapshotItemSource` | `diff/source.rs:28` | `tinycortex/sinks.rs` |
-| `EntityOccurrenceIndex` | `graph/types.rs:44` | `tinycortex/sinks.rs` |
+| `TreeJobSink` | `ingest/types.rs:15` | `tinycortex/ingest.rs` |
+| `TreeLeafSink` | `archivist/sink.rs:44` | `tinycortex/ingest.rs` |
+| `SnapshotItemSource` | `diff/source.rs:28` | host diff adapter |
+| `EntityOccurrenceIndex` | `graph/types.rs:44` | host graph adapter |
 | `SelfIdentity` | `store/entity_index/store.rs:25` | host identity registry |
 | `GoalsGenerator` | `goals/reflect.rs:57` | `tinycortex/chat.rs` |
 | `SourceReader` | `sources/readers/mod.rs:1732` | local readers only *(amended: live-sync readers join the crate in W-SYNC, plan §8)* |
 | `SyncEventSink` *(new, W-SYNC)* | `sync/traits.rs` (planned) | `tinycortex/sync_sink.rs` → `MemorySyncStage` bus events |
 | `SkillDocSink` *(new, W-SYNC)* | `sync/traits.rs` (planned) | forwards to `MemoryClient::store_skill_sync` (host-retained unified tier) |
-| `ConversationEventBus` / `ChannelEventHandler` | `conversations/bus.rs:106/95` | `tinycortex/bus.rs` (translate to `DomainEvent`) |
+| `ConversationEventBus` / `ChannelEventHandler` | `conversations/bus.rs:106/95` | host `memory_conversations/bus.rs` (translate to `DomainEvent`) |
 
 Config seam: `MemoryConfig{workspace, embedding: EmbeddingConfig{dim,model,strict},
 tree: TreeConfig{input_token_budget,output_token_budget,summary_fanout,flush_age_secs},
@@ -86,7 +91,7 @@ retrieval: RetrievalConfig{default_profile}, sync_budget: SyncBudgetConfig}` +
 
 ### G2 — Graph relation-edge persistence (E2GraphRAG accumulation) — **HARD**
 
-- **Host:** `memory_store/unified/graph.rs`, `unified/query.rs` persist and query co-occurrence
+- **Host:** `memory_store/namespace_store/{graph,query}.rs` persist and query co-occurrence
   / LLM-triple relations; `NamespaceMemoryHit.supporting_relations: Vec<GraphRelationRecord>`
   is populated at retrieval.
 - **Crate:** persists the **entity occurrence index** at persist time

docs/tinycortex-drift-ledger.md

@@ -25,7 +25,9 @@ touched an engine-mapping memory module after the port line, and classifies each
 | Host audit SHA | `7850cf363559bcbb7ba688cbc4fccdb6bd9ce754` (`main`, 2026-07-04) |
 | TinyCortex submodule | `vendor/tinycortex` → `tinyhumansai/tinycortex` |
 | TinyCortex audit SHA | `d1a8c7be2babc8fff7a72ed93861f459f3d6fa58` |
-| **TinyCortex pinned SHA (current)** | `a8e10f7dd8ebdb9b0905e1380fefcc6bf5a65207` — audit SHA **+ #59** (native-dep alignment, §0.4) **+ #63/#64** (D2/D1 drift ports) merged; this is the live gitlink |
+| TinyCortex historical cutover SHA | `a8e10f7dd8ebdb9b0905e1380fefcc6bf5a65207` — audit SHA **+ #59** (native-dep alignment, §0.4) **+ #63/#64** (D2/D1 drift ports) merged |
+| **TinyCortex reviewed gitlink (2026-07-22)** | `daaaf6ba5f02635c08deae2b2b2ed7fcc8c06b6a` — includes OpenHuman #4794/#4820/#4863-era crate work; upstream currently has no tags |
+| **TinyCortex migration branch (current)** | `7b4b115` — TinyAgents 2.1 dependency alignment, standalone patch configuration, and corrected sync ownership docs |
 | TinyCortex crate version | `0.1.1` |
 | **Port line (derived)** | **after 2026-06-25, before 2026-06-28** (see below) |
 
@@ -38,6 +40,11 @@ touched an engine-mapping memory module after the port line, and classifies each
 > (conversations) are now unblocked per the gate rule. D4 (memory_sync corpus,
 > W-SYNC) remains its own separate track.
 
+> **Consolidation status (2026-07-22): D1–D4 CLOSED.** D1–D3 remain closed.
+> D4 was re-audited against the crate sync implementation and the live host
+> dispatch path. The host schedulers, credentials, RPC, source-scope/redaction
+> policy, product task normalizers, and event-bus adapters remain host-owned.
+
 ### How the port line was located
 
 The port commits in `vendor/tinycortex` are all dated **2026-06-29**, but that is the date the
@@ -132,26 +139,23 @@ its `tools/` stay host (agent tools), its `vector`/`scoring` are engine (W5) —
 
 ## D4 — memory_sync corpus (2026-07-09 reclassification, W-SYNC)
 
-The plan's §8 amendment moves the sync engine into the crate, so the blanket **HOST-OWNED
-"live sync"** classification above is superseded for engine-mapping sync code. Unlike D1–D3 there
-is **no existing crate port to diff against** — the entire `memory_sync/` engine (plus the
-`memory_sources` dispatcher/reconcile parts) is port scope. The port baseline for W-SYNC is taken
-**fresh from host `main` at W-SYNC.1 branch time**, so ordinary drift cannot accumulate; this entry
-exists to (a) record the reclassification and (b) pin the post-port-line commits that already
-touched the corpus, so the W-SYNC.1 port provably includes them:
+The plan's §8 amendment moved the generic sync engine into the crate, so the
+blanket **HOST-OWNED "live sync"** classification above is superseded for
+engine-mapping sync code. The crate port landed in `0333d10` and is the path
+called by `memory_sync::composio::run_connection_sync` and the default
+`ComposioProvider::sync` implementation.
 
 | # | Host commit | Files in corpus | Note |
 | --- | --- | --- | --- |
-| D4.1 | `c43f79641` (07-03) | `composio/providers/{sync_state,traits}.rs` | TinyAgents-cutover import churn |
-| D4.2 | `27b00b539` (07-05) | `sources/rebuild.rs` | test-parity cleanup (1 line) |
-| D4.3 | `653e6e143` (07-06) | `memory_sources/sync.rs` (+312) | self-heal drifted content-sha tokens + prune vanished folder items |
-| D4.4 | `e456b7799` (07-07) | `memory_sources/{rpc,sync}.rs`, `canonicalize/email.rs`, `composio/providers/{gmail/post_process,notion/source,orchestrator}.rs`, `sources/github.rs` | orchestration-fixes wave |
-
-**Gate:** W-SYNC.1 (crate scaffolding PR) requires this enumeration current as of its branch point
-(re-run the scan: `git log --since=2026-06-25 --oneline -- src/openhuman/memory_sync
-src/openhuman/memory_sources`); the W-SYNC.3 host flip requires D4 **CLOSED** — every listed commit
-(and any accrued since) verifiably contained in the crate port or explicitly waived. Host-retained
-parts (schedulers, bus subscribers, RPC wrappers, keychain/OAuth) remain HOST-OWNED as before.
+| D4.1 | `c43f79641` (07-03) | `composio/providers/{sync_state,traits}.rs` | ✅ **CLOSED.** Import churn only; persistence and provider dispatch are implemented by the `SyncStateStore` seam and crate dispatcher. |
+| D4.2 | `27b00b539` (07-05) | `sources/rebuild.rs` | ✅ **CLOSED.** Test-only parity cleanup; no engine semantic delta. |
+| D4.3 | `653e6e143` (07-06) | `memory_sources/sync.rs` (+312) | ✅ **CLOSED.** Crate `sync/workspace.rs` updates changed items and prunes vanished items through `LocalDocumentSink::delete`; covered by workspace sync tests. |
+| D4.4 | `e456b7799` (07-07) | `memory_sources/{rpc,sync}.rs`, `canonicalize/email.rs`, `composio/providers/{gmail/post_process,notion/source,orchestrator}.rs`, `sources/github.rs` | ✅ **CLOSED.** Generic provider fetch/pagination/canonical memory records are in the crate port; orchestration, product task normalization, action-result presentation, and RPC fixes are host policy by design. |
+
+**Gate result:** D4 is **CLOSED**. Gmail's Composio 413 mitigation is additionally
+present in crate commit `ba9e12e` (25-message fetch pages). Host-retained parts
+(schedulers, bus subscribers, RPC wrappers, keychain/OAuth, action tools and
+product task/profile projections) remain HOST-OWNED.
 
 ## Closing the ledger (procedure)